coli More.Faropenem is a new oral beta-lactam antibiotic unique from carbapenems and other available beta-lactams. Genome annotation databases EnsemblBacteria iĪAC73195 AAC73195 b0084 BAB96652 BAB96652 BAB96652ĮchoBASE - an integrated post-genomic database for E. This subsection of the Sequence section indicates if the canonical sequence displayed by default in the entry is in its mature form or if it represents the processing i: The displayed sequence is further processed into a mature form. This subsection of the Sequence section indicates if the canonical sequence displayed by default in the entry is complete or status i : Complete. The current subsections and their content are listed below:More.Sequence i The information is filed in different subsections. It also includes information pertinent to the sequence(s), including length and molecular weight. This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. Superfamily database of structural and functional annotation More.SUPFAM i View protein in Pfam PF03717, PBP_dimer, 1 hit PF00905, Transpeptidase, 1 hit View protein in InterPro IPR012338, Beta-lactam/transpept-like IPR037532, FtsI_transpept IPR005311, PBP_dimer IPR036138, PBP_dimer_sf IPR001460, PCN-bd_Tpept Integrated resource of protein families, domains and functional sites More.InterPro i HAMAP database of protein families More.HAMAP i Gene3D Structural and Functional Annotation of Protein Families More.Gene3D i InParanoid: Eukaryotic Ortholog Groups More.InParanoid iĭatabase for complete collections of gene phylogenies More.PhylomeDB i The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms More.HOGENOM i UniRule annotationĬurated Keywords - Domain i Transmembrane, Transmembrane helix Phylogenomic databasesĮvolutionary genealogy of genes: Non-supervised Orthologous Groups More.eggNOG i Protein Data Bank in Europe - Knowledge Base More.PDBe-KB iīelongs to the transpeptidase family. SWISS-MODEL Repository - a database of annotated 3D protein structure models More.SMR iĭatabase of comparative protein structure models More.ModBase i
Pbp3 ecoli uniprot code#
These elements correspond to the DSSP secondary structure code 'T'.More.Turn i This subsection of the 'Structure' section is used to indicate the positions of experimentally determined hydrogen-bonded turns within the protein sequence. This subsection of the 'Structure' section is used to indicate the positions of experimentally determined beta strands within the protein strand i
Pbp3 ecoli uniprot manual#
Information inferred from a combination of experimental and computational evidence, without manual validation.Īutomatic assertion inferred from combination of experimental and computational evidence i
This subsection of the 'Structure' section is used to indicate the positions of experimentally determined helical regions within the protein i Legend: Helix Turn Beta strand PDB Structure known for this area Show more details Hide details Feature key Manual assertion based on experiment in i Once cleaved, a propeptide generally has no independent biological i PRO_0000017053 This subsection of the PTM / Processing section describes a propeptide, which is a part of a protein that is cleaved during maturation or activation. Peptidoglycan D,D-transpeptidase FtsI Add BLAST This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic i PRO_0000017052 This section describes post-translational modifications (PTMs) and/or processing / Processing i Molecule processing Feature key It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed lineage iĬellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › Escherichia coli This subsection of the Names and taxonomy section contains the taxonomic hierarchical classification lineage of the source organism. This is known as the 'taxonomic identifier' or 'taxid'.More.Taxonomic identifier i
This subsection of the Names and taxonomy section shows the unique identifier assigned by the NCBI to the source organism of the protein.
This subsection of the Names and taxonomy section provides information on the name(s) of the organism that is the source of the protein i